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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015887658.1_cds_XP_016442077.1_37377
CDS Infomation

[gene=LOC107767551] [db_xref=GeneID:107767551] [protein=cysteine--tRNA ligase, chloroplastic/mitochondrial-like isoform X3] [protein_id=XP_016442077.1] [location=complement(join(381..557,1021..1128,1213..1437,1864..1989,2068..2352,2425..2595,3088..3274,3426..3433))] [gbkey=CDS]
Sequence

ATGAAAAGGTGCTTAACGGTCGGTTCTTTTCAGATAATTCGTCGGGCTAACGAGTTTGGA
GAGGACCCAATAGCTTTGAGTGGTCGATACTGCCAGGAGTTTCTAAAAGACATGGATGAT
CTCCAATGCCTCCCACCAATTCATCAGCCTCGTGTTAGTGAGCATATGGAGGAGATTAAG
GAAATGATAGCTAAGGTAATGACTAATGGCTATGCATATACAGTTGATGGAGATGTTTAT
TTCTCTGTCGATAGTTTTCCAGAGTATGGTCGCATATCTGGACAAAAATTAGAAGATAAT
CGAGCTGGAGTACGCTTTGCAGTTGATTCAAGAAAGCTAAATCCTGCTGACTTTGCCTTG
TGGAAGGCTGCAAAGCCTGGTGAACCAAGTTGGGACAGCCCCTGGGGTCGTGGAAGACCA
GGTTGGCATATAGAATGCAGTGCAATGAGTGCCTACTATTTAACACATTCTTTTGATATA
CATGGTGGTGGAATGGACTTGATTTTTCCTCACCATGAGAATGAGATTGCCCAGAATTGC
GCTGCTTGTGGCCCGGAGAGTAATGTTAGCTACTGGATGCATAATGGTTTTGTTACCATA
GATGATGAGAAAATGTCGAAATCATTGGGGAACTTCTTCACTATACGTGAGGTTACTCGA
TTGTACCATCCCATTGCATTGAGGTACTTCTTGTTGGGGACGCACTACCGATCTCCTGTT
AATTACTCAATATCACAGATAGAAATTGCTTCAGAATCTGTGTATTACATTTATCAGACC
TTACATGATAGTGAAGAAGCTTTGTCTGCTTTCCAACAAGGAACTGTAACAGAAACAAAA
GTAAAGGGGGTGCGTGTTAGCCCTCAGGCCCAAGAATGCATCAGCGAGTTGCGTAATGAA
TTGGAGACAAAGCTTTCTGACGATTTGCATACACCTGCAATTTTAAATGCTGCTCTTCAA
GAAGCCCTTAGACTTATGAATAGCTATGTGAACATGCTGAAGAAAAAGCAACAACAGTTA
TCTGTTATTTTGTACCTAAGTGAGCTCCAGAAAGAAGTGAAGGCAGTGCTGGATGTCCTT
GGATTGCTCCTTGGTTCAACTTGTGCTGAGGTTTTGCAGCAGTTTAAAGAGAGAGCACTG
AAAAGGGCTGACTTGACGGAGGAAGATATTTTGCTTGCAATAGAGGAAAGAGCACTAGCA
AGGAAAAATAAGGAGTTTGCAAGAAGCGATCAGATTAGAACTGATTTAGTGGCCAAGGGA
ATTGCTTTAATGGACATAGGGACATAA

Peptide Sequence

PEP ID

XP_016442077.1
PEP Infomation

PREDICTED: cysteine--tRNA ligase, chloroplastic/mitochondrial-like isoform X3 [Nicotiana tabacum]
Sequence

MKRCLTVGSFQIIRRANEFGEDPIALSGRYCQEFLKDMDDLQCLPPIHQPRVSEHMEEIK
EMIAKVMTNGYAYTVDGDVYFSVDSFPEYGRISGQKLEDNRAGVRFAVDSRKLNPADFAL
WKAAKPGEPSWDSPWGRGRPGWHIECSAMSAYYLTHSFDIHGGGMDLIFPHHENEIAQNC
AACGPESNVSYWMHNGFVTIDDEKMSKSLGNFFTIREVTRLYHPIALRYFLLGTHYRSPV
NYSISQIEIASESVYYIYQTLHDSEEALSAFQQGTVTETKVKGVRVSPQAQECISELRNE
LETKLSDDLHTPAILNAALQEALRLMNSYVNMLKKKQQQLSVILYLSELQKEVKAVLDVL
GLLLGSTCAEVLQQFKERALKRADLTEEDILLAIEERALARKNKEFARSDQIRTDLVAKG
IALMDIGT

Transcript Sequence

Gene sequence data has not been registered.